hifiasm
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Which mode to selecte
Hello, professor Because our species is a diploid of interspecific hybridization, it is not clear whether the recombination and exchange between the two sets of chromosomes have occurred. I want to retain this structural variation, so I would like to ask the professor whether the trio-binning typing is directly excluded the chromosomal rearrangement, resulting in undetectable chromosomal rearrangement variants? Hifi-trio and hifi-hic, which method do you recommend to use?