chhylp123
chhylp123
Hi @VanessaUg, thanks for letting me know. Could you please share the entire log file? It seems that hifiasm crashed after nearly completing everything, which I haven’t encountered before. For...
Can you use Globus? Globus is easier and faster.
Which email are you using? I could add your email to our endpoints.
I will cut a new release this weekend to solve this issue. Sorry for the delay.
This is hard to say. It really depends on the reference genome you are using.
Can you share me the fastq file? Looks like a bug.
ONT assembly often requires higher coverage than the HiFi assembly due the higher error rate. 25x might be a little bit lower. In addition, our test often directly run hifiasm...
Could you please show me the log file?
Do you have log file? Thanks!
It seems this sample has high het rate. In this case, you may consider to use Hi-C scaffolding to separate different haplotypes.