waragraph
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Hi I'm currently trying to load in a BED or GFF file when loading in the GFA. No gene coordinates are overlayed. I've tried with a BED file and GFF:...
After getting my hands on a computer with better specs (see: previous issue with buffer size), there seems to be problems with dual GPU systems. It seems to only identify...
It'd be useful to go from 2D to 1D by clicking on the 2D view. I'm sure you have a plan to do this, just bookmarking it.
The node I'm pointing at with the mouse appears to be correct: ![Screenshot from 2023-06-26 12-52-21](https://github.com/chfi/waragraph/assets/145425/9c3c9d93-d852-40a3-aedc-eb265e125976) But, when I move to the right hand side of this node in the...
When zoomed in, such as shown, the order of paths appears to change when scrolling up and down in the path list via the up and down errors or the...
I've gotten 1D mode to work nicely, but I'm having trouble with 2D and I suspect graph size is to blame. Are there plans to support larger data, or possibly...
The `path_name_hash` color scheme, generated in [app/src/viewer_1d/util](https://github.com/chfi/waragraph/blob/master/app/src/viewer_1d/util.rs), relies on the number of paths being less than the device texture dimension limit. It should probably use a storage buffer (or maybe...
``` (base) tim@thinkpad-P15:~/waragraph$ ./target/release/waragraph test/data/A-3105.fa.353ea42.34ee7b1.1576367.smooth.fix.gfa test/data/A-3105.layout.tsv [2023-05-26T14:15:52Z WARN wgpu_hal::gles::egl] No config found! [2023-05-26T14:15:52Z WARN wgpu_hal::gles::egl] EGL says it can present to the window but not natively [2023-05-26T14:15:52Z WARN wgpu_hal::vulkan::instance] Disabling...
probably using https://crates.io/crates/async-compression
e.g. using prefix sum where applicable