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Published 20 hours ago • verified publisher icon chasemc

Sample data

Open chasemc opened this issue 2 years ago • 1 comments

These mzML files:

example_data.zip

are also available from here: https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=7ce7c09a174545a4a7dfe80af25329b0

chasemc avatar Feb 15 '23 23:02 chasemc

For playing with more spectra, see the data associated with the following publications, at the links provided:

  • Clark CM, Costa MS, Sanchez LM, Murphy BT. Coupling MALDI-TOF mass spectrometry protein and specialized metabolite analyses to rapidly discriminate bacterial function. Proc Natl Acad Sci U S A. 2018 May 8;115(19):4981-4986. doi: 10.1073/pnas.1801247115. Epub 2018 Apr 23. PMID: 29686101; PMCID: PMC5949002.

    • https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=41abf33196e647389f009bc3ebab5456

  • Costa MS, Clark CM, Ómarsdóttir S, Sanchez LM, Murphy BT. Minimizing Taxonomic and Natural Product Redundancy in Microbial Libraries Using MALDI-TOF MS and the Bioinformatics Pipeline IDBac. J Nat Prod. 2019 Aug 23;82(8):2167-2173. doi: 10.1021/acs.jnatprod.9b00168. Epub 2019 Jul 23. PMID: 31335140; PMCID: PMC7197193.

    • https://doi.org/doi:10.25345/C5261K

  • Clark CM, Hernandez A, Mullowney MW, Fitz-Henley J, Li E, Romanowski SB, Pronzato R, Manconi R, Sanchez LM, Murphy BT. Relationship between bacterial phylotype and specialized metabolite production in the culturable microbiome of two freshwater sponges. ISME Commun. 2022 Mar 10;2:22. doi: 10.1038/s43705-022-00105-8. PMCID: PMC9723699.

    • https://doi.org/doi:10.25345/C5F84T

chasemc avatar Feb 15 '23 23:02 chasemc