How to add other more metabolic pathways?

[AlwaysUp-Lin]

Hi, The scFEA is an amazing method for metabolic analysis, it helps me a lot. But I am wondering whether I can add other more pathways to the original metabolic pathways, such as arachidonic acid metabolism and how to create STOICHIOMETRY_MATRIX file with numbers of -1,0,1 on my own. I cannot figure out the way to create STOICHIOMETRY_MATRIX file. Thank you very much!

[ChiZhangPKU]

We offer a web server-based version of scFEA to enable the analysis: http://scflux.org/. If you still need more analysis, please contact Chi Zhang [email protected]

[AlwaysUp-Lin]

Dear professor, Sorry to interrupt you again, I still wanna use scFEA analysis, but arachidonic acid metabolism cannot be found in the original input data. So, could you tell me how to create STOICHIOMETRY_MATRIX file or could you add arachidonic acid metabolism to the algorithm? Please~

Best regards!

(View it on https://github.com/changwn/scFEA/issues/36)

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[paolabc]

Hi

I have the same question, and I would like to know if you know how I could do so.

Thanks in adavance for being available.

Best, Paola