Update github actions' versions

[emiliofernandes]

Github Actions prints the following warnings:

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

For example see https://github.com/ccsb-scripps/AutoDock-Vina/actions/runs/6097045926

While here also improve the names of the CI job and steps