cluster_roi
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Python script to perform the spatially constrained parcellation of functional MRI data as described in Craddock et al., Human Brain Mapp., 33 (9) 2012
Apologies if this is a naive issue, but in running the spatial corr code, I get an error from line 77 of make_local_connectivity_scorr saying the tuple is out of the...
I have installed numpy, scipy and nibabel with python version 2.7 and I am trying to test the code on the test data. But I meet an error when I...
eg. in def indx_3dto1d(idx, sz): if (rank(idx) == 1): idx1 = idx[0] * prod(sz[1:3]) + idx[1] * sz[2] + idx[2] else: idx1 = idx[:, 0] * prod(sz[1:3]) + idx[:, 1]...
KeyError
Hi I keep getting a KeyError with the parcel_naming.py `` python parcel_naming.py random_all.nii.gz random '10,20,30,40,50,60,70,80,90,100,110,120,130,140,150,160,170,180,190,200,210,220,230,240,250,260,270,280,290,300,350,400,450,500,550,600,650,700,750,800,850,900,950' [10, 20, 30, 40, 50, 60, 70, 80, 90, 100, 110, 120, 130, 140, 150,...
Hey, I am using this package to parcellate 60 fMRI data. When I run the group_binfile_parcellation script, I get Memory Error. My computer has 16 GB of RAM. I read...
Also included is the alternative band-aid script I originally wrote while troubleshooting.