ml4bio-workshop
ml4bio-workshop copied to clipboard
carpentries-incubator
Materials for a workshop introducing machine learning to biologists
We can use verb originating sentences to make it move obvious when participants are supposed to actively do something in a lesson subsection. For example, "Opening the ml4bio software" or...
We can adopt the colored signs or post its that other Carpentries workshops use to allow participants to indicate when they completed a step in a lesson. That will help...
If you find some really cool, a little bit mainstream ML in Bio example - please post it here!
I was put into contact with Lis Sulmont at McGill University, who is conducting a survey on professors who teach machine learning to non-CS types. We do not have experience...
In the surveys, some participants wanted to know more about how to assess whether they can get started on ML for a real dataset. For instance, how many samples are...
In the model selection lesson, we can list the evaluation metrics when in the "Evaluation Metrics" section and state that we'll define and explore each of them in more detail...
https://github.com/gitter-lab/ml-bio-workshop/blob/gh-pages/guide/software.md is now redundant with our https://github.com/gitter-lab/ml-bio-workshop/blob/gh-pages/_extras/about.md We should also consider splitting the setup instructions so that only the literal steps to follow appear in that document. The update scripts,...
The guides in https://github.com/gitter-lab/ml-bio-workshop/tree/gh-pages/guide explain each classifier. We should render these so they can be linked from the lesson website.
The Travis CI test currently only tests the guide Markdown files https://github.com/gitter-lab/ml-bio-workshop/blob/f926cbade85db4b31fd40507218e6acd7f94b913/.travis.yml#L49
Some of our current links are hard-coded. We can convert these to relative links to make it easier to adapt and port this workshop.
Metadata
Owner
Metadata
Materials for a workshop introducing machine learning to biologists