camillaln

Hi, I am trying to run your GAPPadder software. However, I get an error that we can not figure out. Could you please give some advice? Do we need a...

issues with KEGG annotations and KO mapping

6

Hi, I have used metaerg to annotate metagenome bins, and have found some issues with the KEGG annotations. I tested out a Methanogen MAG. It has the McrA gene and...

master.tsv

1

Hi, Thank you very much for this awesome pipeline! I have a problem with my master.tsv file, kegg_pathways and metacyc_pathways are not reported for the genes - see attached. (They...

DRAM database installation problem; The subcommand mmseqs createindex DRAM_data/uniref90.20240308.mmsdb DRAM_data/tmp --threads 10 experienced an error

4

Hi, I am having problems installing the DRAM database. I get the same error on two different servers. I installed DRAM following the instructions: git clone https://github.com/WrightonLabCSU/DRAM.git cd DRAM conda...

Hi, I am trying to install VirSorter2 and I am having numpy isses. I also tried the aptainer and got the same error. I Installed numpy 1.19 in my vs2...