Tiffany J. Callahan

> Hi @callahantiff, just caught up with the discussion here and I agree that this would be a great solution! I can envision adding timestamps to the edge metadata and...

> Hi @callahantiff, I had the time today to read everything. I think it sounds good! I don't think I am in a position to propose a better way of...

Hi, @matthias-samwald thanks for your interest PheKnowLator! 😄 We are currently using a mixture of URIs, those that come with each ontology (most are OBO PURLs) and the non-OBO PURLs...

After taking time to think about this and to review available resources for identifier resolution, we have decided to give [Bioregistry](https://bioregistry.io/) a try, which also happens to include `identifiers.org` as...

> Hi @callahantiff, dropping in for a quick comment that Scott Malec (@kingfish777) mapped relations in the Relation Ontology to the above relation patterns for our symmetric and transitive closure...

Also add a header key that provides definitions for all required input parameters.

Similarly related -- use the info here, like the prefix used for nodes to update the `edge_source_metadata.txt` files. As well as creating named graphs or incorporating relevant information into the...

Make sure that we are getting the most up-to-date data from each source, including our queries

Zip all data files to reduce storage space

Verify the gene and disease identifier mappings for genes, disease, and chemicals. Some weirdness is happening.