datahub
datahub copied to clipboard
Amaria et al. Neoadjuvant immune checkpoint blockade in high-risk resectable melanoma. Nat Med. 2018
https://www.ncbi.nlm.nih.gov/pubmed/30297909
- [ ] create a issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
- [ ] List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
- [ ] Document the curation process, e.g. how and by whom the data was transformed
- [ ] Follow the data checklist
- [ ] Create a pull request to datahub once the data is curated
- [ ] Push to triage portal
- [ ] Import into msk and public portal database
- [ ] Update cBioPortal news
Data Availability:
- Whole-exome sequencing, T cell receptor sequencing and Nanostring digital spatial profiling data are available from the European Genome-phenome Archive under accession number EGAS00001003178.
- Supplemental data: patient ID (3 samples each: Baseline, On-treatment, Baseline to on-treatment), treatment, responses, sample collecting time point
@jjgao Could you please let us know if there's any way for us to access the European Genome-phenome Archive and download the sequencing data from there? If not, I'll send an email to the author.
@yichaoS please contact them. You will need to contact them to get EGA access too.
This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.
This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.
This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.
This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.
This issue is being closed as we couldn't get a response from the author.