datahub Nagashima et al. Japanese version of The Cancer Genome Atlas, JCGA, established using fresh frozen tumors obtained from 5143 cancer patients.

Nagashima et al. Japanese version of The Cancer Genome Atlas, JCGA, established using fresh frozen tumors obtained from 5143 cancer patients.

Open schultzn opened this issue 5 years ago • 5 comments

Is the data available for download? https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7004528/

Please keep this checklist for curation of a new study.

[ ] create an issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
[ ] List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
[ ] Document the curation process, e.g. how and by whom the data was transformed
[ ] Follow the data checklist
[ ] Create a pull request to datahub once the data is curated
[ ] Push to triage portal
[ ] Import into msk and public portal database
[ ] Update the default quick select study list see https://github.com/cBioPortal/cbioportal/issues/5831 (only for studies that are not overlapping with existing ones; only for human tumors, not cell lines)
[ ] Update cBioPortal news