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Remove track doesn't work on first try when coming from homepage
When coming from homepage and clicking on Ras/RAF in CRC the remove track button does not work on first try
How to reproduce:
- Go to the RAS/RAF alterations in colorectal cancer example
- Try removing any of the genes by using the
Remove track
option
It doesn't remove the track on the first try. After the first try the feature works as expected.
Looks like when we have an QOL query it is not possible to remove the gene with the OQL at all.
To reproduce
- Go to https://deploy-preview-4907--cbioportalfrontend.netlify.app/results/oncoprint?cancer_study_list=coadread_tcga_pub&cancer_study_id=coadread_tcga_pub&genetic_profile_ids_PROFILE_MUTATION_EXTENDED=coadread_tcga_pub_mutations&genetic_profile_ids_PROFILE_COPY_NUMBER_ALTERATION=coadread_tcga_pub_gistic&Z_SCORE_THRESHOLD=2.0&case_set_id=coadread_tcga_pub_nonhypermut&gene_list=KRAS%2520NRAS%2520BRAF%253AV600E&gene_set_choice=user-defined-list&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cgistic&geneset_list=%20&tab_index=tab_visualize&Action=Submit
- Try removing
BRAF
It is not possible to remove BRAF
on second try either.
Small update.
gene_list parameter in the example query (which is not working): gene_list=KRAS%20NRAS%20BRAF (KRAS NRAS BRAF) after the removal try, gene_list is changed to the following: gene_list=%250A%2520KRAS%2520NRAS%2520BRAF And then removing is working, you can check it by opening the original URI with modified gene_list
Unfortunately, I wasn't able to reproduce the issue described in the previous message (removing is working on the first time)
I'm new here, and I have no expertise in the medical area, but are there any other symptoms that something is wrong with the querying? It looks like a badly hardcoded URI with the example.
*when I'm querying the same data from the main screen, I receive such URL (removing working fine) https://www.cbioportal.org/results/oncoprint?cancer_study_list=coadread_tcga_pub&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cgistic&case_set_id=coadread_tcga_pub_cna_seq&gene_list=KRAS%2520NRAS%2520BRAF&geneset_list=%20&tab_index=tab_visualize&Action=Submit
TP53 and MDM2/4 alterations in GBM
example is not working as well