Benedikt Best

Results 42 issues of Benedikt Best

Oops Basically I just messed up the handling of when an input OME-Zarr doesn't have coordinateTransformations for each scale. It's not covered by tests because I thought this would be...

I like it in FIJI so I put it in ilastik :) should try to figure out some time how to change the default col width current: ![image](https://github.com/user-attachments/assets/ecaabf6c-107c-4d55-8f2a-15dfcf19e8db) new: ![image](https://github.com/user-attachments/assets/bbb7452f-c5c3-48e4-a303-5017db090bad)...

While testing 1.4.1b17 I noticed that we have various sources of random spam in the console window next to the GUI on Windows and Linux. On Mac there doesn't seem...

![image](https://github.com/user-attachments/assets/68df4532-7fca-4c8d-b61e-493083b37b3f) and ![image](https://github.com/user-attachments/assets/79138e83-901d-49d5-95d3-d15c843861c9) Same for `exr` and `exr sequence` Culprit in `opExportSlot`: ``` _2d_exts = vigra.impex.listExtensions().split() _3d_sequence_formats = [FormatInfo(ext + " sequence", ext, 3, 3) for ext in _2d_exts] ```...

While testing if Carving works with OME-Zarr import/export, I ran into an error which turns out to be known (https://github.com/ilastik/ilastik/issues/2131), because I had chosen a 2D dataset. I decided to...

## Describe the bug When opening an existing complete project with a non-default export format, the table in the export applet shows export locations with ".h5" as the file extension...

bug
data-export

While headless mode now allow processing any dataset within a Zarr store on disc using a `/direct/path/or/uri/to.zarr/dataset` (due to going through z5py), the web loader currently can't load anything else...

When using `ZarrFile.create_dataset` to create a dataset directly at a subpath that has not been pre-created with `create_group`, the group is created without metadata. I.e., the `.zgroup` file containing `{"zarr_format":...

When going to `Export image settings`, choose `n5` as export format. Click `Select` next to file name. The file picker opens at `dataset_dir`, but also has the default file name...

**Description of the problem** I'm debugging why ilastik's builds on Windows fail with pytorch 2.4 and above (https://github.com/ilastik/ilastik/pull/2927), and have been able to trace the problem back to `openmp` version...