Brett Marinelli

I do not see a demo in experiments showing expected training data hierarchy input, specifically for bboxes and/or voxel-level ground truth (if possible). Anyone have luck figuring this out?

Found it, thank you!

Hi Fabian, Thanks so much for the quick response. I took your advice and changed the order for data and seg to 0. Unfortunately this step is still the major...

Hi Fabian, Would definitely appreciate your input. We are actually adapting MIC-DKFZ's medicaldetectiontoolkit repo and using the data_loader.py on batches of 8 x 3 x 256 x 256 x 256....

Hi Paul, Thanks for your help as well. I'm using the same data_loader that you provide in MDTK for the LIDC dataset (numpy file input) except that our image data...

@FabianIsensee and @pfjaeger My apologies! The standalone script above is wrong. This standalone script below does replicate the issue on my machine with dummy data. I'd greatly appreciate if you...

Hi Fabian, Thanks for testing this on your end!. Your other suggestions on ways to decrease batch generation time are also very much appreciated. The desired output is indeed 256....