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Funcotator: all Clinvar fields blank

Open gevro opened this issue 6 months ago • 3 comments

Hi, With the latest version of gatk 4.6.0 and the latest funcotator v1.8 annotation, all Clinvar fields are returning blank, even though there are many variants that I know are in clinvar. Seems like a bug. Thanks

ClinVar_VCF_AF_ESP|ClinVar_VCF_AF_EXAC|ClinVar_VCF_AF_TGP|ClinVar_VCF_ALLELEID|ClinVar_VCF_CLNDISDB|ClinVar_VCF_CLNDISDBINCL|ClinVar_VCF_CLNDN|ClinVar_VCF_CLNDNINCL|ClinVar_VCF_CLNHGVS|ClinVar_VCF_CLNREVSTAT|ClinVar_VCF_CLNSIG|ClinVar_VCF_CLNSIGCONF|ClinVar_VCF_CLNSIGINCL|ClinVar_VCF_CLNVC|ClinVar_VCF_CLNVCSO|ClinVar_VCF_CLNVI|ClinVar_VCF_DBVARID|ClinVar_VCF_GENEINFO|ClinVar_VCF_MC|ClinVar_VCF_ORIGIN|ClinVar_VCF_RS|ClinVar_VCF_ID|ClinVar_VCF_FILTER

gevro avatar Aug 26 '24 21:08 gevro