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Bug in FilterMutectCalls: --min-reads-per-strand with volume greater than 1, works equal to 1

Open zoldrax opened this issue 2 years ago • 0 comments

Probably, it must be (x < minReadsOnEachStrand) instead of (x == 0) https://github.com/broadinstitute/gatk/blob/618f3b1fd59145ccab5a5ca6e1cb8f987f118823/src/main/java/org/broadinstitute/hellbender/tools/walkers/mutect/filtering/StrictStrandBiasFilter.java#L34C75-L34C75

zoldrax avatar Aug 09 '23 22:08 zoldrax