Problem creating gatk-sv Workflow in AWS HealthOmics

[eprdz]

Hello,

Is it possible to upload this workflow to AWS HealthOmics? I have worked with other GATK and WARP workflows smoothly, but I'm having problems creating a workflow with this one.

Everything seems to be OK but in the end, the creation always fails with a huge error text with a lot of warnings of the AWS linter. I don't know if it might be because of the size of the workflow, as other workflows with linter warnings have been correctly uploaded in HealthOmics.

I was wondering if you knew anything about it.

Thank you in advance.