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How can I apply downstream filtering steps to the cleaned VCF to further control the false discovery rate?

Open elitefugua opened this issue 8 months ago • 0 comments

How can I apply downstream filtering steps (minGQ filtering, FilterOutlierSamples, BatchEffect, and FilterCleanupQualRecalibration) to the cleaned VCF to further control the false discovery rate?

elitefugua avatar Oct 30 '23 08:10 elitefugua