gatk-sv
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Define a common VCF header
It's going above and beyond but it strikes me that we repeat a bunch of these header strings around the codebase a bunch and it would be pretty handy to put them into an svtk
module somewhere similar to how we have GATKVCFHeaderLines
and GATKSVVCFHeaderLines
in the gatk
repo. Then we could just easily set up a method or little loop to add all the standard lines in places like this where we want to create a VCF from scratch.
Originally posted by @cwhelan in https://github.com/broadinstitute/gatk-sv/pull/346#discussion_r892693033