Cromwell stalled at waitingforreturncode

[dianacornejo]

Hello, I'm trying to run a workflow locally and it gets stalled on BackgroundConfigAsyncJobExecutionActor [5b4a3086Regenie.RegenieStep1WholeGenomeModel:NA:1]: Status change from - to WaitingForReturnCode

I'm using a local backend

I'm attaching the workflow which is written in WDL language

I'm attaching a screenshot of the configuration file and the input files which I provide to cromwell in json format

Also I'm proving the workflow called regenie.txt regenie.txt I'm providing the full log file as well. regenie.log If I run the commands locally without using a WDL workflow this runs in under 10 seconds in my local computer.

I appreciate any insight.

I'm using cromwell-85.jar and my java version is openjdk version "17.0.6" 2023-01-17 OpenJDK Runtime Environment Temurin-17.0.6+10 (build 17.0.6+10) OpenJDK 64-Bit Server VM Temurin-17.0.6+10 (build 17.0.6+10, mixed mode, sharing)

I'm running this on a MacOS 13.3.1

Thanks a lot