list-outputs functionality is broken

[yfarjoun]

list-outputs seems to be broken:

Sub-Command: list-outputs
Using workflow-id == e9da649f-807e-4ddc-8e80-4b63192ae1d3
Using workflow server URL == https://cromwell-v39.dsde-methods.broadinstitute.org
                  __     
       .,-;-;-,. /'_\    
     _/_/_/_|_\_\) /     
   '-<_><_><_><_>=/\     
     `/_/====/_/-'\_\    
      ""     ""    ""    
                  __     
       .,-;-;-,. /'_\    
     _/_/_/_|_\_\) /     
   '-<_><_><_><_>=/\     
     `/_/====/_/-'\_\    
      ""     ""    ""    
Could not parse JSON output from cromwell server.
Output files from job https://cromwell-v39.dsde-methods.broadinstitute.org:e9da649f-807e-4ddc-8e80-4b63192ae1d3 : 

[yfarjoun]

nm. my output was just too darn long.....

[yfarjoun]

hmmm. I still think that this is somewhat broken. I can run jq on my own:

~/cromshell/cromshell -t 100 metadata  e9da649f-807e-4ddc-8e80-4b63192ae1d3 | jq ".outputs"
Sub-Command: metadata
Using workflow-id == e9da649f-807e-4ddc-8e80-4b63192ae1d3
Using workflow server URL == https://cromwell-v39.dsde-methods.broadinstitute.org
                  __     
       .,-;-;-,. /'_\    
     _/_/_/_|_\_\) /     
   '-<_><_><_><_>=/\     
     `/_/====/_/-'\_\    
      ""     ""    ""    
{
  "Benchmark.summary": "gs://broad-dsde-methods/cromwell-execution-39/Benchmark/e9da649f-807e-4ddc-8e80-4b63192ae1d3/call-CombineSummaries/summary.csv"
}

So cromshell should be able to do the same.

[yfarjoun]

also, why the double turtle?