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Published 20 hours ago • verified publisher icon broadinstitute

05-Introduction-R-Bioconductor.Rmd misnamed slot

Open pyrAmider opened this issue 4 years ago • 0 comments

At line 459 of 05-Introduction-R-Bioconductor.Rmd, Seurat object ‘pbmc_small’ does not have the slot “data”. Maybe a slice of slot ‘assays’ is intended, as recommended below?

sparse_matrix <- pbmc_small@assays$RNA@data[1:10, ]

pyrAmider avatar Mar 24 '20 13:03 pyrAmider