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QC: test mapping files for expected databases

3

- Based on the expected databases in a mapping file (which are different for GeneProtein/Metabolite/Etc.), there should be an output which databases should be present in the mapping files. @egonw...

DeniseSl22

Issues filtering for datasource (in Webservice, in R) and in Cytoscape?

10

@tabbassidaloii and me have been checking the issues with the xref batch query. Issue reported by @egonw: ``` https://webservice.bridgedb.org/Human/xrefs/S/O14494?dataSource=L ``` this seems to ignore the ?dataSource=L parameter. Issue reproduced by...

DeniseSl22

Have the QC tool report on metadata alignment with DataCite

1

Right now, Derby files often report something like this: ``` DATASOURCENAME Ensembl BUILDDATE 20230311 SERIES Homo sapiens genes and proteins DATATYPE GeneProduct DATASOURCEVERSION 108 SCHEMAVERSION 3 ``` This needs to...

egonw