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:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)

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This is an attempt to fix the shellcheck failures in #1703 There is one "style" issue left that I'm not sure can be fixed.

Running `brew style homebrew-bio` find problems with the scripts `build-bottles.yml` and `upload-bottles.yml`. This prevents any PRs from passing tests. ``` $ brew style homebrew-bio/ Inspecting 337 files ................................................................................................................................................................................................................................................................................................................................................. 337 files...

- [x] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [x] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [x] Have you...

# Please fill out the issue checklist below, and provide all of the requested information. # Please always follow these steps: - [ x] Confirmed this is a problem with...

Hi, The pull request to bump the bali-phy version keeps failing on one or two architectures, but only (I think) because `brew livecheck` is failing. Is there a solution for...

- [x] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [x] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [x] Have you...

- [x] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [x] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [x] Have you...

- [ ] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [ ] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [...

- [ ] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [ ] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [...

- [ ] Have you followed the [guidelines for contributing](https://github.com/brewsci/homebrew-bio/blob/master/CONTRIBUTING.md)? - [ ] Have you checked that there aren't other open [pull requests](https://github.com/brewsci/homebrew-bio/pulls) for the same formula update/change? - [...