partitionfinder icon indicating copy to clipboard operation
partitionfinder copied to clipboard

Consider packaging / distribution for 2.0 (maybe using a Conda recipe)

Open brettc opened this issue 10 years ago • 2 comments

PF 2.0 moves away from the "batteries included" approach in PF 1.0, as we dependencies on various packages (numpy etc), and we might also require building a cython extension. Python packaging is notoriously crappy, so we could consider anaconda packaging as a supported solution. ie. Download anaconda; use "conda install partfinder2".

brettc avatar Feb 05 '15 19:02 brettc

Hi Brett,

in principle Anaconda worked fine for me when I tried it.

If I understand correctly, Anaconda will not be required if all packages are already installed, but it is an additional supported solution?

Best Christoph

Am 05.02.2015 um 20:14 schrieb Brett Calcott:

PF 2.0 moves away from the "batteries included" approach in PF 1.0, as we dependencies on various packages (numpy etc), and we might also require building a cython extension. Python packaging is notoriously crappy, so we could consider anaconda packaging as a supported solution. ie. Download anaconda; use "conda install partfinder2".

— Reply to this email directly or view it on GitHub.


Dr. Christoph Mayer Email: [email protected] Tel.: +49 (0)228 9122 403

Zoologisches Forschungsmuseum Alexander Koenig

  • Leibniz Institut für Biodiversität der Tiere - Adenauerallee 160 53113 Bonn, Germany www.zfmk.de

Stiftung des öffentlichen Rechts; Direktor: Prof. J. W. Wägele Sitz: Bonn


cmayer avatar Feb 05 '15 21:02 cmayer

I'm just talking about providing an easy way for someone to install PF 2.0, by using the Anaconda packaging system, perhaps one that we might explicitly support.

Q: "PF 2.0 does NOT run on my foobar linux systems cluster with custom compiled python and random packages installed"

A: Install anaconda python. Run "conda install pf2".

Of course, PF2 should run easily enough on other installations. But that often depends on the know how of the users.

brettc avatar Feb 05 '15 23:02 brettc