design-bench
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brandontrabucco
Benchmarks for Model-Based Optimization
According to the Design-bench [paper](https://arxiv.org/pdf/2202.08450), the TF Bind 8 dataset by default includes binding affinity data for TF SIX6_REF_R1. I understand that the Design-bench dataset is currently undergoing migration. In...
Hi, `DiskResource` has been completely changed to now support downloading from a HuggingFace datasets repository. (Just to keep things simple I completely removed the Google Cloud logic, but if you...
I have defined a new task, and the entire data collection for 'Defining New MBO Tasks' ran successfully. However, when I used design_bench.make to set up the new task, it...
Hello I installed the design-bench package the way you mentioned that didn't require MuJoCo and every thing goes fine until when I am trying to import design-bench I get this...
Hi, when I'm trying to use **design_bench.make** to set up tasks, it fails to download GFP data. Checking the code, I found that in file `disk_resource.py`, line 105, `request.get` got...
Hi. Thank you for the great work and for publishing the benchmark. I am experimenting with the TF10 task and found out that we have more than 4M data points...
Dear authors, Thanks for open sourcing this library. I'm trying to understand if the oracles were trained on normalized or unnormalized x. Thank you for your help. If yes, what...
Installing design-bench using pip failed in certain system due to `setup.py`: ```python F = 'README.md' with open(F, 'r') as readme: LONG_DESCRIPTION = readme.read() ``` Here's the traceback: ``` Traceback (most...
Hi, After following the instructions in the readme (creating a new environment `mbo` with the required dependencies) and trying to create a new task, I get the following error: ```...
Hi Brandon, I recently install and use the dataset from your package. Thanks for your work to build this benchmark. I have a problem with the function _task.normalize_x_. ``` #...
