Basile

Results 60 issues of Basile

Add an examplar of a dicom file in seqinfo to allow access more information in infotodict.

### Summary We use the CMRR multiband sequence for BOLD functional scans, and recently activated the export of phase data. It results in 1 series for the SBRef which includes...

I have problems when using Realign4dAlgorithm, especially with large files in the nipype interface. The memory seems no to be fully cleared then causing memory hog. I tracked down with...

Hi all, trying to use the hrf model module to make regressors with delayed onset: ``` import nipy.modalities.fmri.hemodynamic_models as hm tr=2.15 plot(hm.glover_hrf(tr, oversampling=1.,time_length=200*tr, onset=100*tr)) ``` ![hrf](https://f.cloud.github.com/assets/1155388/2074362/f48c53a0-8d77-11e3-8bd2-e9adbb659f36.png) gave the attached plot,...

**Please describe how the documentation should be improved.** I recently ran smriprep with the longitudinal option, and I thought it would run freesurfer longitudinal full pipeline until I got the...

documentation

It would be great to be able to deface any modality. A json file with pybids entities filters (like fmriprep `--bids-filter-file`) could be provided to identify the images to process....

enhancement
help wanted

I tried the branch enh-arbitrary-dimensions on Philips 4d data and when specifying LAS as voxel_order, the IS axis seems reversed.

### What is the problem? running `datalad get -J 8 .` in a dataset with a single datalad archive will give the following error: ``` [git-annex: .git/annex/tmp/MD5E-s8351481--f35cc3878536756c8567cc9d2421f6e6.7z: removeLink: does not...

### What is the problem? Got a weird error when trying to recursively install a dataset from a local relative path and in fact this is exactly the same problem...

Partially addresses #7468 by adding a `--data` option to `get` command with values similar to `push` command. Passes `--want-get here` to `git-annex get` if `auto` or `auto-if-wanted` (and preferred content...

semver-minor