LocusCompare

Introduction

LocusCompare is an interactive visualization tool for comparing two genetic association datasets. For instance, it can be used to visualize the colocalization between a GWAS dataset to an eQTL dataset, which is particularly useful for fine-mapping studies.

Usage

Please see the FAQ page and the documentation page

Questions

For questions and bug reports, please open an issue here.

Citation

If you use locuscompare, please cite the following paper: https://www.nature.com/articles/s41588-019-0404-0

Boxiang Liu, Michael J. Gloudemans, Abhiram S. Rao, Erik Ingelsson & Stephen B. Montgomery (2019) Abundant associations with gene expression complicate GWAS follow-up, Nature Genetics