scGPT
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gene expression generation from custom cell prompts
Hello!
I am looking to fine-tune scGPT on my own dataset, from which I have scRNAseq data, as well as a time-related label per cell. How would I go about using these labels as cell annotations (how can I encode them), and how would I then later be able to use similar custom labels as 'cell prompts' to generate new gene expression data?