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Bioinformatics tool outputs converter to JSON or YAML
Bumps [safety](https://github.com/pyupio/safety) from 3.0.1 to 3.2.0. Release notes Sourced from safety's releases. 3.1.0 What's Changed feat: add headless auth by @yeisonvargasf in pyupio/safety#508 fix: support pydantic2 by using safety_schemas 0.0.2...
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Bumps [black](https://github.com/psf/black) from 24.2.0 to 24.4.2. Release notes Sourced from black's releases. 24.4.2 This is a bugfix release to fix two regressions in the new f-string parser introduced in 24.4.1....
Bumps [platformdirs](https://github.com/platformdirs/platformdirs) from 3.11.0 to 4.2.1. Release notes Sourced from platformdirs's releases. 4.2.1 What's Changed Switch to ruff for formatting and use codespell and docformatter by @gaborbernat in platformdirs/platformdirs#261 Use...
Bumps [paambaati/codeclimate-action](https://github.com/paambaati/codeclimate-action) from 5.0.0 to 6.0.0. Release notes Sourced from paambaati/codeclimate-action's releases. v6.0.0 6.0.0 (2024-04-26) ⚠ BREAKING CHANGES ci: this doesn't change the functionality of the core action, but it...
Bumps [pytest-cov](https://github.com/pytest-dev/pytest-cov) from 4.1.0 to 5.0.0. Changelog Sourced from pytest-cov's changelog. 5.0.0 (2024-03-24) Removed support for xdist rsync (now deprecated). Contributed by Matthias Reichenbach in [#623](https://github.com/pytest-dev/pytest-cov/issues/623) <https://github.com/pytest-dev/pytest-cov/pull/623>_. Switched docs theme...
Bumps [types-pyyaml](https://github.com/python/typeshed) from 6.0.12.12 to 6.0.12.20240311. Commits See full diff in compare view [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter...
Bumps [bandit](https://github.com/PyCQA/bandit) from 1.7.9 to 1.7.10. Release notes Sourced from bandit's releases. 1.7.10 What's Changed Bump docker/build-push-action from 5.4.0 to 6.0.0 by @dependabot in PyCQA/bandit#1147 Suggested small refactors in assignments...
Bumps [safety](https://github.com/pyupio/safety) from 3.2.7 to 3.2.8. Changelog Sourced from safety's changelog. [3.2.8] - 2024-09-27 feat: enhance version comparison logic for check-updates command (#605) docs: add demo Jupyter Notebook (#601) feat:...
Bumps [types-pyyaml](https://github.com/python/typeshed) from 6.0.12.20240808 to 6.0.12.20240917. Commits See full diff in compare view [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter...