host_gene_microbiome_interactions
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blekhmanlab
Analysis framework for integrating gut microbiome and host gene expression data
I met an error when using lasso scripts in my data. Could you probably know what's wrong with my data from the error message? > > lasso.proj.fit Nodewise regressions will...
> source("hdi_lasso_proj_loocv_MSI.R") Loading required package: doParallel Loading required package: foreach Loading required package: iterators Loading required package: parallel [1] "Number of workers: 20" [1] "genes.list: /data/longyong/lasso/gene_list.txt" [1] "genes.table: /data/longyong/lasso/gene_small.txt" [1]...
Thanks for sharing the interesting work and manuscript. It would be great if you can add the license file in this repo if in case you are planning to release...
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Analysis framework for integrating gut microbiome and host gene expression data