Some errors in installation

[Yangr116]

Thanks for your nice work!!!

But, I met some errors in the process of installation. Please see below.

INFO: LeeSigma cython module not found. (run build process?) INFO: LeeSigma2 cython module not found. (run build process?) INFO: N-Dimensional Beltrami cython modules not found. (run build process?) INFO: Bilateral module not found. (run build process?) INFO: SRAD cython module not found. (run build process?) INFO: EMDES cython module not found. (run build process?) INFO: IDANQ cython module not found. (run build process?) /home/yr2/PyRAT/pyrat/viewer/Dialogs.py:251: SyntaxWarning: "is not" with a literal. Did you mean "!="? elif pyrat.data.layers[layer].name is not '': /home/yr2/PyRAT/pyrat/viewer/Dialogs.py:371: SyntaxWarning: "is" with a literal. Did you mean "=="? if itemname[0] is 'L': /home/yr2/PyRAT/pyrat/viewer/Dialogs.py:392: SyntaxWarning: "is" with a literal. Did you mean "=="? elif itemname[0] is 'D': Traceback (most recent call last): File "setup.py", line 9, in <module> import pyrat.lib.nlsar.nlsetup as nlsetup File "/home/yr2/PyRAT/pyrat/__init__.py", line 105, in <module> from . import filter File "/home/yr2/PyRAT/pyrat/filter/__init__.py", line 9, in <module> from .Spectrum import * File "/home/yr2/PyRAT/pyrat/filter/Spectrum.py", line 10, in <module> from pyrat.filter import Unweight File "/home/yr2/PyRAT/pyrat/filter/Unweight.py", line 2, in <module> matplotlib.use('Qt5Agg') File "/home/yr2/.conda/envs/pyrat/lib/python3.8/site-packages/matplotlib/__init__.py", line 1171, in use plt.switch_backend(name) File "/home/yr2/.conda/envs/pyrat/lib/python3.8/site-packages/matplotlib/pyplot.py", line 284, in switch_backend raise ImportError( ImportError: Cannot load backend 'Qt5Agg' which requires the 'qt5' interactive framework, as 'headless' is currently running

And, my env packages are OK.

Looking forward to your reply, thanks!

[birgander2]

The syntax warning are puzzeling me a bit, I don't get them. Can you tell me your Python version (I use 3.7), Windows or Linux? Latest master version?

[Yangr116]

The syntax warning are puzzeling me a bit, I don't get them. Can you tell me your Python version (I use 3.7), Windows or Linux? Latest master version?

Thanks for your quick reply.

I used python version == 3.7.1 in Linux.

My conda list is as below(Sorry, I don't know how to show it better):

Name Version Build Channel _libgcc_mutex 0.1 main anyio 2.2.0 py37h06a4308_1 argon2-cffi 20.1.0 py37h27cfd23_1 asn1crypto 1.4.0 pyh9f0ad1d_0 conda-forge async_generator 1.10 py37h28b3542_0 attrs 21.2.0 pyhd3eb1b0_0 babel 2.9.1 pyhd3eb1b0_0 backcall 0.2.0 pyhd3eb1b0_0 blas 1.0 mkl bleach 3.3.0 pyhd3eb1b0_0 blosc 1.21.0 h8c45485_0 boost-cpp 1.70.0 ha2d47e9_1 conda-forge brotli 1.0.9 he6710b0_2 brotlipy 0.7.0 py37h27cfd23_1003 brunsli 0.1 h2531618_0 bzip2 1.0.8 h7b6447c_0 ca-certificates 2021.5.25 h06a4308_1 cairo 1.14.12 h8948797_3 certifi 2020.12.5 py37h06a4308_0 cffi 1.14.4 py37h11fe52a_0 conda-forge chardet 4.0.0 py37h06a4308_1003 charls 2.2.0 h2531618_0 cloudpickle 1.6.0 py_0 cryptography 2.5 py37hb7f436b_1 conda-forge curl 7.64.0 h646f8bb_0 conda-forge cycler 0.10.0 py37_0 cython 0.29.23 pypi_0 pypi cytoolz 0.11.0 py37h7b6447c_0 dask-core 2021.5.0 pyhd3eb1b0_0 dbus 1.13.18 hb2f20db_0 decorator 5.0.7 pyhd3eb1b0_0 defusedxml 0.7.1 pyhd3eb1b0_0 entrypoints 0.3 py37_0 expat 2.3.0 h2531618_2 ffmpeg 4.0 hcdf2ecd_0 fontconfig 2.13.1 h6c09931_0 freeglut 3.0.0 hf484d3e_5 freetype 2.10.4 h5ab3b9f_0 freexl 1.0.5 h516909a_1002 conda-forge fsspec 0.9.0 pyhd3eb1b0_0 gdal 2.3.2 py37h2924dbc_0 geos 3.6.2 heeff764_2 gettext 0.19.8.1 hf34092f_1004 conda-forge giflib 5.1.9 h516909a_0 conda-forge glib 2.66.3 h58526e2_0 conda-forge graphite2 1.3.14 h23475e2_0 gst-plugins-base 1.14.0 h8213a91_2 gstreamer 1.14.0 h28cd5cc_2 h5py 2.8.0 py37h989c5e5_3 harfbuzz 1.8.8 hffaf4a1_0 hdf4 4.2.13 0 conda-forge hdf5 1.10.2 hba1933b_1 icu 58.2 he6710b0_3 idna 2.10 pyhd3eb1b0_0 imagecodecs 2021.4.28 py37h581e88b_0 imageio 2.9.0 pyhd3eb1b0_0 importlib-metadata 3.10.0 py37h06a4308_0 importlib_metadata 3.10.0 hd3eb1b0_0 intel-openmp 2021.2.0 h06a4308_610 ipykernel 5.3.4 py37h5ca1d4c_0 ipython 7.22.0 py37hb070fc8_0 ipython_genutils 0.2.0 pyhd3eb1b0_1 jasper 2.0.14 h07fcdf6_1 jedi 0.17.0 py37_0 jinja2 2.11.3 pyhd3eb1b0_0 joblib 1.0.1 pyhd3eb1b0_0 jpeg 9b h024ee3a_2 json-c 0.13.1 hbfbb72e_1002 conda-forge json5 0.9.5 py_0 jsonschema 3.2.0 py_2 jupyter-packaging 0.7.12 pyhd3eb1b0_0 jupyter_client 6.1.12 pyhd3eb1b0_0 jupyter_contrib_core 0.3.3 py_2 conda-forge jupyter_contrib_nbextensions 0.5.1 pyhd8ed1ab_2 conda-forge jupyter_core 4.7.1 py37h06a4308_0 jupyter_highlight_selected_word 0.2.0 py37h89c1867_1002 conda-forge jupyter_latex_envs 1.4.6 pyhd8ed1ab_1002 conda-forge jupyter_nbextensions_configurator 0.4.1 py37h89c1867_2 conda-forge jupyter_server 1.4.1 py37h06a4308_0 jupyterlab 3.0.14 pyhd3eb1b0_1 jupyterlab_pygments 0.1.2 py_0 jupyterlab_server 2.4.0 pyhd3eb1b0_0 jxrlib 1.1 h7b6447c_2 kealib 1.4.7 h77bc034_6 kiwisolver 1.3.1 py37h2531618_0 krb5 1.16.3 hc83ff2d_1000 conda-forge lcms2 2.12 h3be6417_0 ld_impl_linux-64 2.33.1 h53a641e_7 lerc 2.2.1 h2531618_0 libaec 1.0.4 he6710b0_1 libcurl 7.64.0 h01ee5af_0 conda-forge libdap4 3.19.1 h6ec2957_0 libdeflate 1.7 h27cfd23_5 libedit 3.1.20191231 he28a2e2_2 conda-forge libffi 3.2.1 he1b5a44_1007 conda-forge libgcc-ng 9.1.0 hdf63c60_0 libgdal 2.3.2 h9d4a965_0 libgfortran-ng 7.3.0 hdf63c60_0 libglib 2.66.3 hbe7bbb4_0 conda-forge libglu 9.0.0 hf484d3e_1 libiconv 1.16 h516909a_0 conda-forge libkml 1.3.0 h4fcabce_1010 conda-forge libnetcdf 4.6.1 h5e45101_3 conda-forge libopencv 3.4.2 hb342d67_1 libopus 1.3.1 h7b6447c_0 libpng 1.6.37 hbc83047_0 libpq 10.6 h13b8bad_1000 conda-forge libsodium 1.0.18 h7b6447c_0 libspatialite 4.3.0a he475c7f_19 libssh2 1.8.0 h1ad7b7a_1003 conda-forge libstdcxx-ng 9.1.0 hdf63c60_0 libtiff 4.1.0 h2733197_1 libuuid 1.0.3 h1bed415_2 libvpx 1.7.0 h439df22_0 libwebp 1.0.1 h8e7db2f_0 libxcb 1.14 h7b6447c_0 libxml2 2.9.10 hb55368b_3 libxslt 1.1.34 hc22bd24_0 libzopfli 1.0.3 he6710b0_0 locket 0.2.1 py37h06a4308_1 lxml 4.6.3 py37h9120a33_0 lz4-c 1.9.3 h2531618_0 mako 1.1.4 pyhd3eb1b0_0 markupsafe 1.1.1 py37h14c3975_1 matplotlib 3.3.4 py37h06a4308_0 matplotlib-base 3.3.4 py37h62a2d02_0 mistune 0.8.4 py37h14c3975_1001 mkl 2021.2.0 h06a4308_296 mkl-service 2.3.0 py37h27cfd23_1 mkl_fft 1.3.0 py37h42c9631_2 mkl_random 1.2.1 py37ha9443f7_2 nbclassic 0.2.6 pyhd3eb1b0_0 nbclient 0.5.3 pyhd3eb1b0_0 nbconvert 6.0.7 py37_0 nbformat 5.1.3 pyhd3eb1b0_0 ncurses 6.2 he6710b0_1 nest-asyncio 1.5.1 pyhd3eb1b0_0 networkx 2.2 py37_1 notebook 6.3.0 py37h06a4308_0 numexpr 2.7.3 py37h22e1b3c_1 numpy 1.20.1 py37h93e21f0_0 numpy-base 1.20.1 py37h7d8b39e_0 olefile 0.46 py37_0 opencv 3.4.2 py37h6fd60c2_1 opencv-contrib-python 4.5.2.52 pypi_0 pypi openjpeg 2.3.1 h981e76c_3 conda-forge openssl 1.0.2u h7b6447c_0 packaging 20.9 pyhd3eb1b0_0 pandas 1.2.4 py37h2531618_0 pandoc 2.12 h06a4308_0 pandocfilters 1.4.3 py37h06a4308_1 parso 0.8.2 pyhd3eb1b0_0 partd 1.2.0 pyhd3eb1b0_0 pcre 8.44 he6710b0_0 pexpect 4.8.0 pyhd3eb1b0_3 pickleshare 0.7.5 pyhd3eb1b0_1003 pillow 8.2.0 py37he98fc37_0 pip 21.0.1 py37h06a4308_0 pixman 0.40.0 h7b6447c_0 poppler 0.65.0 h581218d_1 poppler-data 0.4.10 0 conda-forge proj4 5.0.1 h14c3975_0 prometheus_client 0.10.1 pyhd3eb1b0_0 prompt-toolkit 3.0.17 pyh06a4308_0 ptyprocess 0.7.0 pyhd3eb1b0_2 py-opencv 3.4.2 py37hb342d67_1 pycparser 2.20 py_2 pygments 2.8.1 pyhd3eb1b0_0 pyopenssl 19.0.0 py37_0 conda-forge pyparsing 2.4.7 pyhd3eb1b0_0 pyqt 5.9.2 py37h05f1152_2 pyrsistent 0.17.3 py37h7b6447c_0 pysocks 1.7.1 py37_1 python 3.7.1 hd21baee_1001 conda-forge python-dateutil 2.8.1 pyhd3eb1b0_0 python_abi 3.7 1_cp37m conda-forge pytz 2021.1 pyhd3eb1b0_0 pywavelets 1.1.1 py37h7b6447c_2 pyyaml 5.4.1 py37h27cfd23_1 pyzmq 20.0.0 py37h2531618_1 qt 5.9.6 h8703b6f_2 readline 7.0 hf8c457e_1001 conda-forge requests 2.25.1 pyhd3eb1b0_0 scikit-image 0.18.1 py37ha9443f7_0 scikit-learn 0.24.2 py37ha9443f7_0 scipy 1.6.2 py37had2a1c9_1 send2trash 1.5.0 pyhd3eb1b0_1 setuptools 52.0.0 py37h06a4308_0 sip 4.19.8 py37hf484d3e_0 six 1.15.0 py37h06a4308_0 snappy 1.1.8 he6710b0_0 sniffio 1.2.0 py37h06a4308_1 sqlite 3.28.0 h8b20d00_0 conda-forge terminado 0.9.4 py37h06a4308_0 testpath 0.4.4 pyhd3eb1b0_0 threadpoolctl 2.1.0 pyh5ca1d4c_0 tifffile 2021.4.8 pyhd3eb1b0_2 tk 8.6.10 hbc83047_0 toolz 0.11.1 pyhd3eb1b0_0 tornado 6.1 py37h27cfd23_0 traitlets 5.0.5 pyhd3eb1b0_0 typing_extensions 3.7.4.3 pyha847dfd_0 urllib3 1.26.4 pyhd3eb1b0_0 wcwidth 0.2.5 py_0 webencodings 0.5.1 py37_1 wheel 0.36.2 pyhd3eb1b0_0 xerces-c 3.2.2 hea5cb30_1003 conda-forge xz 5.2.5 h7b6447c_0 yaml 0.2.5 h7b6447c_0 zeromq 4.3.4 h2531618_0 zfp 0.5.5 h2531618_6 zipp 3.4.1 pyhd3eb1b0_0 zlib 1.2.11 h7b6447c_3 zstd 1.4.9 haebb681_0

Looking forward to your new reply, thanks.