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new data source: CellMarker

Open andrewsu opened this issue 5 years ago • 0 comments

CellMarker: a manually curated resource of cell markers in human and mouse

Publication: https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gky900/5115823 Download page: http://biocc.hrbmu.edu.cn/CellMarker/download.jsp

Head of human file:

speciesType	tissueType2	cancerType	cellType	cellName3	cellMarker	geneSymbol	geneID	proteinName	proteinID	markerResource	PMID	Company
Human	Kidney	Normal	Normal cell	Proximal tubular cell	Intestinal Alkaline Phosphatase	ALPI	248	PPBI	P09923	Experiment	9263997	NA
Human	Liver	Normal	Normal cell	Ito cell (hepatic stellate cell)	Synaptophysin	SYP	6855	SYPH	P08247	Experiment	10595912	NA
Human	Endometrium	Normal	Normal cell	Trophoblast cell	CEACAM1	CEACAM1	634	CEAM1	P13688	Experiment	10751340	NA
Human	Germ	Normal	Normal cell	Primordial germ cell	VASA	DDX4	54514	DDX4	Q9NQI0	Experiment	10920202	NA
Human	Corneal epithelium	Normal	Normal cell	Epithelial cell	KLF6	KLF6	1316	KLF6	Q99612	Experiment	12407152	NA
Human	Placenta	Normal	Normal cell	Cytotrophoblast	FGF10	FGF10	2255	FGF10	O15520	Experiment	15950061	NA
Human	Periosteum	Normal	Normal cell	Periosteum-derived progenitor cell	CD166, CD45, CD9, CD90	ALCAM, PTPRC, CD9, THY1	214, 5788, 928, 7070	CD166, PTPRC, CD9, THY1	Q13740, P08575, P21926, P04216	Experiment	15977065	NA
Human	Amniotic membrane	Normal	Normal cell	Amnion epithelial cell	NANOG, OCT3/4	NANOG, POU5F1	79923, 5460	NANOG, PO5F1	Q9H9S0, Q01860	Experiment	16081662	NA
Human	Primitive streak	Normal	Normal cell	Primitive streak cell	LHX1, MIXL1	LHX1, MIXL1	3975, 83881	LHX1, MIXL1	P48742, Q9H2W2	Experiment	16258519	NA

andrewsu avatar Oct 08 '18 03:10 andrewsu