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Some uniprot.Swiss-Prot are not available

Open leexgh opened this issue 1 year ago • 1 comments

Uniprot.Swiss-Prot for some genes are not available after the recent update. For example gene AR(entrez ID 367) doesn't have uniprot information anymore https://mygene.info/v3/gene/367?fields=uniprot, it should return P10275 in the response. This is the link to uniprot: https://www.uniprot.org/uniprotkb/P10275/entry

leexgh avatar Oct 18 '23 21:10 leexgh

@leexgh we checked, the root cause here is UniProt no longer provides the mapping from P10275 to NCBIGene 367 any more. Not sure if that's intended or an issue on their end.

You can see the difference from these two records:

https://www.uniprot.org/uniprotkb/P24941/entry (contains "GeneID: 1017", also linked to NCBI Gene page)

v.s.

https://www.uniprot.org/uniprotkb/P10275/entry (does not contains "GeneID: 367" any more)

newgene avatar Oct 19 '23 18:10 newgene