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problem with installing Bio::DB::Fasta module

Open shaghayeghsoudi opened this issue 3 years ago • 3 comments

Hello, I have trying for several days to install Bio::DB::Fasta module on my conda enviornment. I t should be straightforward to install but I keep getting this error message Can't locate Bio/DB/Fasta.pm in @INC (you may need to install the Bio::DB::Fasta module)

I gave tried different ways even forced to install but all failed. I appreciate of you could help me to fix this issue to continue with my analysis.

shaghayeghsoudi avatar Jul 02 '21 00:07 shaghayeghsoudi

I'm over a month late to the party, but how did you install it?

yzhernand avatar Aug 06 '21 14:08 yzhernand

Unfortunately, No. I could not. I switched to TrackSigFreq. But would like to know if there is any solution to fix that bioperl installation. That was pain which eventually did don't work

shaghayeghsoudi avatar Aug 07 '21 02:08 shaghayeghsoudi

what conda pkg did you install? perl-bioperl-core and perl-bioperl ?

Jason Stajich @hyphaltip http://lab.stajich.org

On Fri, Aug 6, 2021 at 7:04 PM Shaghayegh Soudi @.***> wrote:

Unfortunately, No. I could not. I switched to TrackSigFreq. But would like to know if there is any solution to fix that bioperl installation. That was pain which eventually did don't work

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hyphaltip avatar Aug 09 '21 20:08 hyphaltip