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Published 20 hours ago • verified publisher icon biolink

Remove ontobio's usage of deprecated networkx methods

Open deepakunni3 opened this issue 4 years ago • 1 comments

Networkx 2.4 has deprecated a few methods including graph.node[]. The recommendation is to use graph.nodes[].

All calls to graph.node --> graph.nodes

deepakunni3 avatar Nov 22 '19 00:11 deepakunni3

Yes please.. In general, it would be great if we could update to a newer networkx version because of all the breaking changes between 2.2 and 2.3.

@jannahastings also had trouble with that, when trying the library

matentzn avatar Dec 10 '20 10:12 matentzn