biolink-model
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canonical_predicate meta-predicate should have its own documentation page
The 2.0 release docs https://biolink.github.io/biolink-model/Migration_2.0_Guide.html has
Inverses
added inverses for the majority of biolink predicates.
primary direction of predicate tagged with ‘biolink:canonical_predicate’.
this is v nice, and it's easy to see in the yaml:
affects:
is_a: related to
description: >-
describes an entity that has a direct affect on the state or quality
of another existing entity. Use of the 'affects' predicate implies that
the affected entity already exists, unlike predicates such as
'affects risk for' and 'prevents, where the outcome is something
that may or may not come to be.
in_subset:
- translator_minimal
annotations:
tag: biolink:canonical_predicate
value: true
however, the URI for canonical_predicate doesn't resolve, It would be good if it had its own entry in the model yaml and thus its own URI/markdown page, showing the list of all elements that are tagged with this
we should also have some docs about how to obtain these programmatically but let's get bmt on rtd first
https://github.com/biolink/biolink-model-toolkit/issues/47
We also need to make the tag appear in the individual markdowns for each predicate
e,g https://biolink.github.io/biolink-model/docs/affects
is canonical_direction but this is not apparent on the page