orange3-single-cell
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biolab
workflows to demonstrate how to answer biological questions
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evaluate different normalization methods and quantify the results with classification methods
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show me the list of different cell clusters
- what are the top N differentially expressed genes in each cluster?
- What is the likely cell type for each cluster?
- How did you determine the cell type? Can you show the classical markers that define the cell types?
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what changed between two conditions per cell type?
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how do I know this is high-quality data? show me list of markers for each cluster that makes me believe its the right cell type?
