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pypi install

Open mortonjt opened this issue 5 years ago • 0 comments

Right now, we can install songbird via pip, but it'll require numpy and biom-format to be installed before hand. One way to do this is to create a conda environment as follows

conda create -n songbird pip numpy biom-format
source activate songbird
pip install songbird

This is not great, since even for the simple pip install, we'll need to have a conda install. May want to explore deploying docker containers.

mortonjt avatar Jul 15 '19 13:07 mortonjt