snpflip

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Hello, I cannot run snpflip on the linux terminal. I have done "pip install snpflip""pip install biopython".But when I tried to run "python snpflip --instructions" or "snpflip --instructions" in the...

euruijia

Hi, snpflip is giving me one position before the position of my original file. example snp flip positions 1 10 1 15 1 25 real positions 1 11 1 16...

ericgonzalezs

IndexError: string index out of range

15

Get this error when using human_g1k_v37.fasta. Is there a log file that I can check the cause of this error?

bio-bench

duplicated SNP in the .reverse file

1

Hi there: I ran snpflip for each chromosome following the example. But I got a lot of duplicated SNP in the reverse file. Plink can't use it with duplicated SNPs....

saintland