Simulation Stop Rule

[WilliamIX]

Hello! I've been finding this simulation tool extremely useful, and think a feature that would enhance this is to be able to have a rule type which will terminate a simulation when a specified condition is met. What I have in mind I think would be a heaviside function that would end the simulation when a species, or the sum of a subset of the species (kept track of by an additive rule) exceeds or goes below some threshold. Ideally it would return the truncated simulation.

Thanks @rlwillia for the suggestion

[WilliamIX]

@rlwillia: would an algebraic expression with =, <, or > stopping the simulation as soon as the expression is true be sufficient? Code for this kind of rule already exists in lineages in order to divide so we could very easy extend it to stop a non-lineage simulation.

[rlwillia]

Yeah! That sort of rule would be perfect.

Best,

Rory

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From: William Poole [email protected] Sent: Tuesday, April 28, 2020 10:26:46 AM To: biocircuits/bioscrape [email protected] Cc: Williams, Rory L. [email protected]; Mention [email protected] Subject: Re: [biocircuits/bioscrape] Simulation Stop Rule (#27)

@rlwilliahttps://github.com/rlwillia: would an algebraic expression with =, <, or > stopping the simulation as soon as the expression is true be sufficient? Code for this kind of rule already exists in lineages in order to divide so we could very easy extend it to stop a non-lineage simulation.

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