Brad Hart

Thank you for squeezemeta! You have done a lot for the research community! On Thu, 20 Jan 2022, 8:20 pm Fernando Puente-Sánchez, < ***@***.***> wrote: > Great, thanks for compiling...

when you are in your conda environment, you can try: conda install -c bioconda snpEff=4.3 see how that goes.

looks like you may have made a typo when specifying the location of your centrifuge file. [14:45:40] ERROR: Can not find file /Users/nfs/abdeljalil/db-**cenrifuge**/.1.cf required by centrifuge

Man... R is painful sometimes. Thanks for running your eye over it. Just one thing though which you may have noticed, doesn't matter which way you fix the issue it...

Hi Narciso, Done! I have created a repository here: https://github.com/stenotrophomonas/tormesbot/wiki/Tormesbot Feel free to delete this thread from the issues section! cheers mate Brad

Hi Narciso, Hahaha, thank you! Wow, you moved countries! That is a lot of disruption and distraction! I don't want to put any pressure on you, I just really like...

- Uninstall tormes `conda env remove -n tormes-1.3.0` - clean conda environment `conda clean --all` - download tormes .yml file: `wget https://anaconda.org/nmquijada/tormes-1.3.0/2021.06.08.113021/download/tormes-1.3.0.yml` - Run this line to update the .yml...

Firstly, delete all tormes yml files. You have 11 of them saved. rm -rf tormes-1.3.0.yml* download the .yml file again and instead of using the sed command, open the file...

Ignore all those. They are just warnings wanting you to upgrade. These will all be a thing of the past in the next release. On Tue, 6 Sept 2022, 9:21...

Hi @ddesai5 Did you create your metadata file in windows or in linux? Check that the file is unix compatible for 'new line'. If you are using windows, use notepad++...