Bill Denney

Results 181 issues of Bill Denney

After generating a linear model, I often need to do subsequent operations to compute differences between contrasts and more accurately the difference between the coefficients of the fixed effects. Typically,...

I have a relatively common use case where I need to modify .pdf files by combining parts of multiple .pdf files. For example, I may want pages 1-2 from input1.pdf,...

Related to #539 I use a variant of this often in my data pipelines where I want to select a certain number of values and be sure that I'm only...

When using model abbreviations available in NONMEM 7.5 like in [pheno_nm750.mod.txt](https://github.com/UUPharmacometrics/PsN/files/5713205/pheno_nm750.mod.txt), I get an error with execute: This appears to be an issue with the parser where it is grouping...

These lines indicate the bootstrap dataset creation is somewhat fragile to the IGNORE statements at the top of the NONMEM control stream: https://github.com/UUPharmacometrics/PsN/blob/c04b9d9b713ade436b8549c74f23a9c5919b0883/lib/tool/bootstrap.pm#L815-L844 I wonder if a sidestep could be...

When I use code like ``` $ABBREVIATED REPLACE THETA(LTVCL)=THETA(6) ``` Preconditioning the model fails probably because it is looking to replace `THETA(6)` with something else instead of `THETA(LTVCL)` (and many...

When running the sse tests with the current GitHub head version (as of 2019-09-19), all the sse tests fail. The error relates to an invalid value for the `threads` argument...

I just got the following errors: ``` It is forbidden to use a synonym for ID in the $INPUT record. at constructor tool::npc::new (defined at /opt/PsN/4.8.0/PsN_4_8_0/tool/npc.pm line 5587) line 2443....

enhancement

When running `sumo` on a model, I see a note that there are final zero gradients. When I look in the .lst file, there are none on the final row....

I'm testing various methods of BLQ handing with a model, and in run1 there are 1109 records, and in run2 there are 900 records due to excluding BLQ in run2....