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Published 20 hours ago • verified publisher icon bigdatagenomics

"bin/mango-submit -h" does not display anything

Open antonkulaga opened this issue 8 years ago • 5 comments

I am very confused by mango documentation When I do "bin/mango-submit -h" I do not get any output even though I have $SPARK_HOME setup in a right way.

antonkulaga avatar Dec 05 '16 00:12 antonkulaga

Hi @antonkulaga! Can you paste the output when you run ./bin/mango-submit -h? It should look something like this: screen shot 2016-12-05 at 9 44 04 am

akmorrow13 avatar Dec 05 '16 08:12 akmorrow13

There is NO output on one machine but console works fine on another, I am confused =(

antonkulaga avatar Dec 10 '16 23:12 antonkulaga

And even on the machine where console works, here is what I see when I run

./example-files/run-example.sh

mango_examples

antonkulaga avatar Dec 11 '16 00:12 antonkulaga

That is correct. you can click on available chromosomes to view the data.

akmorrow13 avatar Dec 11 '16 00:12 akmorrow13

That is correct. you can click on available chromosomes to view the data.

Maximum that I manage to see there is nucleotides. When I saw Readme I thought it is more like a normal genome viewer (with different tracks and useful info) and that image was generated from the example

antonkulaga avatar Dec 11 '16 18:12 antonkulaga