bids-validator icon indicating copy to clipboard operation
bids-validator copied to clipboard

deno validator: complains about EVENT_ONSET_ORDER but AFAIK they are sorted!

Open yarikoptic opened this issue 8 months ago • 0 comments

Got

        [WARNING] The onset column in events.tsv files should be sorted.
 (EVENT_ONSET_ORDER)

                ./sub-0001/ses-02/func/sub-0001_ses-02_task-narratives_acq-mb8_run-01_events.tsv
                        Evidence: schema.rules.rules.checks.events.SortedOnsets
...
                ./sub-0131/ses-04/func/sub-0131_ses-04_task-social_acq-mb8_run-02_events.tsv
                        Evidence: schema.rules.rules.checks.events.SortedOnsets
...
                ./sub-0147/ses-04/func/sub-0147_ses-04_task-fractional_acq-mb8_run-01_desc-posner_events.tsv
                        Evidence: schema.rules.rules.checks.events.SortedOnsets

        Please visit https://neurostars.org/search?q=EVENT_ONSET_ORDER for existing conversations about this issue.

but if I look into those files -- look sorted to me:

(deno) yoh@typhon:/mnt/DATA/data/yoh/1076_spacetop$ diff -Naur ./sub-0131/ses-04/func/sub-0131_ses-04_task-social_acq-mb8_run-02_events.tsv <(sort -n < ./sub-0131/ses-04/func/sub-0131_ses-04_task-social_acq-mb8_run-02_events.tsv)
(deno) yoh@typhon:/mnt/DATA/data/yoh/1076_spacetop$ 

full file is http://www.oneukrainian.com/tmp/sub-0131_ses-04_task-social_acq-mb8_run-02_events.tsv (we are yet to upload to openneuro)

yarikoptic avatar Jun 21 '24 00:06 yarikoptic