bids-standard
fNIRS example dataset (BEP030)
Dataset with functional near-infrared spectroscopy measurements in BIDS format.
- BEP030: https://github.com/bids-standard/bids-specification/pull/802
- Validator PR: https://github.com/bids-standard/bids-validator/pull/952
Complete dataset (without zeroed data) can be found at https://github.com/rob-luke/BIDS-NIRS-Tapping
FYI @rwblair
The tests are failing as the validator is not ready/merged yet.
Thanks @sappelhoff that seems to have worked. The master branch is now going green.
@rob-luke should we also add the NIRS dataset that was prepared by @helenacockx to this pull request and the test?
@robertoostenveld I would prefer if you could add that in a separate PR to the bep030_nirs branch. But having another example would be great!
should we also add the NIRS dataset that was prepared by @helenacockx
Thank you both very much!
Thank you Robert for adding that example! I've recently found out that the 'type'-column for the optodes.tsv file was missing and the optode_layout was in the wrong folder. I will update that in the near future!
Thank you Robert for adding that example! I've recently found out that the 'type'-column for the optodes.tsv file was missing and the optode_layout was in the wrong folder. I will update that in the near future!
I have used the CHANGES file in my branch (see "files changed" and then "v1.1.3-emptyfiles") to document all json/tsv changes that were needed to get the data past the validator with the NIRS extensions that Rob has been working on. We can discuss these in detail later when you are back, and also apply them to the full dataset that you are about to share.
to document all json/tsv changes that were needed to get the data past the validator with the NIRS extensions that Rob has been working on
Please be critical when incorporating feedback from the validator. The validator may have errors and/or the spec may be ambiguous. Now is the time to catch any of these small issues. Thanks for contributing a dataset here too.