Some questions about data processing

[Springfield233]

Good work! I would like to ask the author that the data you provide is only. bin files. Please tell me how to do data preprocessing and could you provide the corresponding code？

[bianhao123]

Thanks! Our data preprocessing pipeline mainly follows the https://github.com/histocartography/seg-gini/blob/main/bin/create_sicap_data.py to create the whole data. And then follow the https://github.com/histocartography/seg-gini/blob/main/bin/preprocess.py to extract the superpixel region feature. The data preprocessing code of our framework version will be released soon.

[Springfield233]

Thanks. I'll try it first.

[wxyz-wjx]

谢谢。我先尝试一下。 请问你解决了数据预处理以及可视化的操作了吗

[zhanghaoyue]

I used the code to extracted patches and the node number does not match yours. It seems you have 5x more nodes than if use segGini's approach...

[SuooL]

The code at https://github.com/histocartography/seg-gini/blob/1c90f832d7c872f8d9eafa72aa6afcdab7808b7f/bin/create_sicap_data.py#L76 can not run successfully. All the mask files were in JPG format, not PNG format.

Can you provide the dataset with PNG masks?