Björn Forsberg

I get the idea. In fact it's getting to be a common question. There's a critical consideration in this situation. Does the "symmetry-break" result in identical, non-symmetrical particles? If you...

In the above I simply pulled emdb entry 22220 and rescaled the pixel size to 6, and ran something like ```relion_project --i emd_22220_small.mrc --rot 45 --tilt 90 --psi 45```

Huh. Is it performed in ```relion_particle_subtract```? Otherwise I might hack the subtraction to pad the box in real-space before subtracting to avoid similar artifacts.

I was asking because subtraction takes an optimiser file so it's less trivial to use ```--new_box``` if the same artifacts occur there. I was using ```relion_project``` to test as it...

So as a workaround for helical subtraction affected by this would be to pad the reconstructions (by 1.5 or so) which the optimiser.star points to and specify the box size...

Hi, Not sure I understand, at the moment it is using Point_2, are you suggesting this: ``` typedef typename Kernel::Point_2 Point_2; ``` I can't see how this would help, but...

Not sure about state of the art, I am exploring methods to represent rasterized microscopy data as varaible-density point clouds for registration and motion embedding that might be easier to...

With the PR referenced in the branch above, the aforementioned compilation errors are resolved. Thank you for the very clear and concise help. There are some further compilation errors that...

I'm using `cmake 3.28.3`, and even if I add ``` set( UI_FILES dialog.ui ibnot.ui ) add_executable( ibnot ${SRCS} ${DT_UI_FILES} ${DT_RESOURCE_FILES} ${UI_FILES} ) ``` to the `CMakeLists.txt` the `dialog.ui` file does...

At the moment I am providing generic image input like jpeg and getting eps out, which suffices for testing simple things. But I agree, cmd-line would be very nice. Down...