rapiclient
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bergant
SEEK platform
tried the package with the SEEK platform, and it is not working
get_api("https://www.fairdomhub.org")
Error in parse_con(txt, bigint_as_char) : lexical error: invalid char in json text. <!doctype html> <html lang="en (right here) ------^
I am not sure on which side the error is, but they say they use openapi ...
The get_api routine requires a link to the API spec at "https://docs.seek4science.org/tech/api/definitions/swaggerSeek-oas3.yml"
However, this spec is a yaml file rather than JSON, so you need to do a quick conversion:
library(rapiclient) library(yaml) library(jsonlite) library(magrittr)
APIspec_yaml <- readLines("https://docs.seek4science.org/tech/api/definitions/swaggerSeek-oas3.yml")
FAIRDOM_SEEK <- read_yaml(text = APIspec_yaml) %>% toJSON() %>% get_api()
In order to create a functioning client, I suspect that you'll need to add basic authentication in to your HTTP header.
SEEKops <- get_operations(FAIRDOM_SEEK, .headers = authenticationHeader )
